PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM09G12570.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 367aa MW: 38227.4 Da PI: 5.9477 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.8 | 7.8e-18 | 180 | 234 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k OGLUM09G12570.1 180 RKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 234 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 127.1 | 7.8e-41 | 180 | 270 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk OGLUM09G12570.1 180 RKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELR-ALK 270 69*************************************************************************************9.555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence |
MELGLSLGEA MADAGRELVL GLGMGRREEA AEAGRRDHEV RRELEFGSMS SRCGGSSPEP 60 TVRLTLLPMV PGLGLPWPPP PPPSSESSEC GDGHLEASTR GFDVNRPPSS GGGGGGGAEE 120 EQDDAAGAAL SSSPNNSAGS FPMDDFSGHG LGGNDAAPGG GGGDRSCSRA SDEDDGGSAR 180 KKLRLSKEQS AFLEESFKEH STLNPKQKLA LAKQLNLRPR QVEVWFQNRR ARTKLKQTEV 240 DCEYLKRCCE TLTEENRRLQ KELAELRALK TVHPFYMHLP ATTLSMCPSC ERVASNSAPA 300 TASSAATSST AAPPAAPSSG GIAATSSSSA AAAAAPDHRP SSFAALFSSP RGFPLSVAPQ 360 AQPPTSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 229 | 237 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 1e-62 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM09G12570.1 |