PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM09G11130.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | AP2 | ||||||||
Protein Properties | Length: 376aa MW: 40649 Da PI: 8.2079 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 41 | 4.7e-13 | 45 | 101 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n ++k+ g ++ +e Aa+a++ a++k++g OGLUM09G11130.3 45 SVYRGVTRHRWTGRFEAHLWDkNSWNEsQNKKGKQGAYDDEEAAARAYDLAALKYWG 101 78*******************8888888775555599******************98 PP | |||||||
2 | AP2 | 52.2 | 1.6e-16 | 144 | 195 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g OGLUM09G11130.3 144 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAMAYDMAAIEYRG 195 89****99**********99966...3.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence |
MAKPRKNSTT TNTSSSGVAA AAAAAVKPKR TRKSVPRESP SQRSSVYRGV TRHRWTGRFE 60 AHLWDKNSWN ESQNKKGKQG AYDDEEAAAR AYDLAALKYW GPDTILNFPL SAYEGELKEM 120 EGQSREEYIG SLRRKSSGFS RGVSKYRGVA RHHHNGRWEA RIGRVFGNKY LYLGTYATQE 180 EAAMAYDMAA IEYRGLNAVT NFDLSRYIKW LRPGADGAGA AQNPHPMLGA LSAQDLPAID 240 LDAMASSFQH DGHGAAAAAA QLIPARHSLG HTPTTSALSL LLQSPKFKEM IERTSAAETT 300 TTTSSTTTSS SSPSPPQATK DDGASPQCSF PEDIQTYFGC AAEDGAAGAG YADVDGLFFG 360 DLAAYASPAF HFELDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.1 | 2e-91 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM09G11130.3 |