PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G10780.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 318aa    MW: 33557.5 Da    PI: 6.5945
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G10780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.31.8e-29143202159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      ++Dgy+WrKYGqK+ +++++pr+Y+rC++a +Cpvkkkv+r+aed ++++ tYegeHnh 
  OGLUM09G10780.1 143 VKDGYQWRKYGQKVTRDNPYPRAYFRCAFApSCPVKKKVQRCAEDRSMLVATYEGEHNHA 202
                      58***************************99****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MDDDSDGSSS PTDDSAAAGL LPLFSRSPAE DLEEKLRRAM EENARLTRAL DAILAGHHAH  60
QRALLAPSLS PPPPSATARA PSVSTSCAAR EDAAPAVAAA AASTACPSRQ QPPTAEPRPK  120
VRTVRVRADA ADATDANSMA ETVKDGYQWR KYGQKVTRDN PYPRAYFRCA FAPSCPVKKK  180
VQRCAEDRSM LVATYEGEHN HALSTKTTEF VASGCTTSQH AGGSSSSPLP CSISINSSGR  240
TITLDLTNQA GSGSIASCGV EAAAVSGEIV TVLSPELRRH LVEEVVQVLK NDPEFVEAVT  300
NAVAARVVDQ IPHIPVHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.26e-38WRKY family protein