PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM09G09500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | G2-like | ||||||||
Protein Properties | Length: 325aa MW: 33453.8 Da PI: 7.451 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 102.5 | 2.7e-32 | 117 | 170 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ OGLUM09G09500.1 117 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 170 9****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 47.1 | 5.4e-15 | 118 | 169 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ OGLUM09G09500.1 118 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 169 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MGFYSSYHHP STWPSTSPSP LAAPPGAASS PLDPTAAFLS SPHHRMLSAA SGRLNGMLSV 60 SDTLRSYGVP GAAAPGVIGG AHHHHHHHHL HGGQPFVGAL ASRFMPKLPA KRSMRAPRMR 120 WTSTLHARFV HAVELLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT VKSTDKPAAS 180 SGPADGGSGD EEFAGGGQAA SGGGDSMCLR GGGGGGAAAA AFAEHGQSAS EGAASSVGGG 240 GGGGDMDQSS AGNTSTTRWS NSSRDPWLSS NSCNMDAHRS VGLSSPIENL EPCRSSSSQV 300 SNHELSSPSL EFTLGRPDWH GADHD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16560.1 | 8e-44 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM09G09500.1 |