PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OGLUM09G04670.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

WRKY

Protein Properties

Length: 692aa MW: 75366.6 Da PI: 6.1985

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM09G04670.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	87.5	1.1e-27	630	682	2	54
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYeg 54 d g++WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+ +d+++v++tY g OGLUM09G04670.1 630 DAGFRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERALHDTRAVITTYAG 682 569************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MALELSLVSA SPPGGLAASP PPPAAIPGKE QQVAGVGILL QISMLVLSFV LGHVLRRHRF 60 YYLPEASASL LIGLVVGGLA NISNTETNTR TQSGFSLSPK PFFANFGAIV TFAILGTFIA 120 SVVTGVLVYL GGLTFLMYKL PFVECLMFGA LISATDPVTV LSIFQELGTD VNLYALVFGE 180 SVLNDAMAIS LYRTMSLVRS QAAAGENFFM MVFQFLETFV GSLSSGCITA QNILNYFKGT 240 FGIVLELDLS LLLYPFPKFY METLFAKHER LCMLSIDHVK LQYLCITIYH LLIACFTVNY 300 FIYYLILCNL DHSVYLFKYA GLDIDKYMLA EGLGLSGIVS ILFTGMVMKH YTFSNLSNNS 360 QRFVSAFFHL LSSLAETFVA VNVFSCAYLV NMSRPEHRRI PLKHQKALWF SGLRGAMAFA 420 LALQSANELP GGHGKTIFTT TTAIVVLTVL LIGGSTGTML EALDVIGDEN RSIENYDDNN 480 GYIPPTYEEG SSSGGGLRMK LKEFHKSTTS FTALDRNYLT PFFTSQTDED DDVFVLRNTP 540 SGCAAAAACA DQYSAATPDN SSVTFGDDEA DNESHSSEGY EPEAKCWKED ADNEGSSGGM 600 GGGAGGKPVR KPRLVVHTLS DIDINIDILD AGFRWRKYGQ KVVKGNPNPR SYYKCTTVGC 660 PVRKHVERAL HDTRAVITTY AGAVVQRDPA VG

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MALELSLVSA SPPGGLAASP PPPAAIPGKE QQVAGVGILL QISMLVLSFV LGHVLRRHRF  60
YYLPEASASL LIGLVVGGLA NISNTETNTR TQSGFSLSPK PFFANFGAIV TFAILGTFIA  120
SVVTGVLVYL GGLTFLMYKL PFVECLMFGA LISATDPVTV LSIFQELGTD VNLYALVFGE  180
SVLNDAMAIS LYRTMSLVRS QAAAGENFFM MVFQFLETFV GSLSSGCITA QNILNYFKGT  240
FGIVLELDLS LLLYPFPKFY METLFAKHER LCMLSIDHVK LQYLCITIYH LLIACFTVNY  300
FIYYLILCNL DHSVYLFKYA GLDIDKYMLA EGLGLSGIVS ILFTGMVMKH YTFSNLSNNS  360
QRFVSAFFHL LSSLAETFVA VNVFSCAYLV NMSRPEHRRI PLKHQKALWF SGLRGAMAFA  420
LALQSANELP GGHGKTIFTT TTAIVVLTVL LIGGSTGTML EALDVIGDEN RSIENYDDNN  480
GYIPPTYEEG SSSGGGLRMK LKEFHKSTTS FTALDRNYLT PFFTSQTDED DDVFVLRNTP  540
SGCAAAAACA DQYSAATPDN SSVTFGDDEA DNESHSSEGY EPEAKCWKED ADNEGSSGGM  600
GGGAGGKPVR KPRLVVHTLS DIDINIDILD AGFRWRKYGQ KVVKGNPNPR SYYKCTTVGC  660
PVRKHVERAL HDTRAVITTY AGAVVQRDPA VG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	4e-34	WRKY family protein

Link Out ? help Back to Top
Ensembl	OGLUM09G04670.1