PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM08G20430.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 580aa    MW: 62893.9 Da    PI: 8.2474
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM08G20430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.52.4e-32182238259
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      +DgynWrKYGqK+vk+se+prsYY+Ct+++C vkkkve s+ d++++ei+Y+g+Hnh+
  OGLUM08G20430.1 182 EDGYNWRKYGQKQVKNSEHPRSYYKCTFTDCAVKKKVESSQ-DGQITEIVYKGSHNHP 238
                      8*************************************999.***************7 PP
2WRKY105.72.4e-33393451159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+vers++d k v++tYeg+Hnhe
  OGLUM08G20430.1 393 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCSVRKHVERSSHDLKSVITTYEGKHNHE 451
                      59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    
MAARTGFGVL KIDTSRVGYS TPIRSPVTIP PGVSPRELLE SPVFLPNAIA QPSPTTGKLP  60
FLMHSNVKPS IPKKTEDETR HDRVFFFQPI LGSKPPTCPV AEKGFSVNHQ NQPSVTDNHQ  120
ELSLQSSSTA AKDFTSATIV KPKTSDSMLD NDDHPSPAND QEENATNKNE EYSSDLIITP  180
AEDGYNWRKY GQKQVKNSEH PRSYYKCTFT DCAVKKKVES SQDGQITEIV YKGSHNHPLP  240
PSNRRPNVPF SHFNDLRDDH SEKFGSKSGQ ATATSWENAA NGHLQDVGSE VLTKLSASLT  300
TTEHAEKSVM DKQEAVDISS TLSNEEDDRV THRAPLSLGF DANDDDVEHK RRKMDVYAAT  360
STSTNAIDIG AVASRAVREP RVVVQTTSEV DILDDGYRWR KYGQKVVKGN PNPRSYYKCT  420
HPGCSVRKHV ERSSHDLKSV ITTYEGKHNH EVPAARNSGH PSSGSAAAPQ ATNGLLHRRP  480
EPAQGGGGGS LAQFGYGSAG HRPAEQFGAA AAGFSFGMLP RSIATPAPSP AIAVPAMQGY  540
PGLVLPRGEM KVNLLPQSGN AGAAASQQLM GRLPKQHPQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.11e-108WRKY family protein