PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM08G19580.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | C2H2 | ||||||||
Protein Properties | Length: 606aa MW: 66494.6 Da PI: 7.3245 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.1 | 0.00062 | 363 | 385 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C+k++ +s + Hi +H OGLUM08G19580.6 363 FECPVCNKTYEEQSRYFGHIGSH 385 89***************999777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 606 aa Download sequence |
METEVFPVVD LRVLTQSDLD ELAAASAHAV DPRSSCPDRA VFNESAGSRK QTFSRVRFVP 60 AAAAAAAAAA ASASAAAAAK LPRGNDKEDS FIAYHLRRLF APDDPSLTEN PSFPQTQTLA 120 RSPSPDPDQL TTNSRGVSVD LVSLSRLADP YDAELGKRTA RMTTEEELMG FISSLEGQWV 180 NQRMRRKLVD ASFFGDHLPS GWRLQLGIER KDRKAWVNCF SYVSPKGQSF ATCQEVSAYL 240 MSLLGYPEFK TDNIEYGSTQ QHGLCADDGV NVLGVQHQIG TSMDSQSNFP VASATFYSHS 300 RDQDETVADD INSYECQQCN LTFHGQSAYA HHLITFHKVS SKRRKSNKVS KFGEPVIGKD 360 GKFECPVCNK TYEEQSRYFG HIGSHAKYQG LTPEAFLQTF SGKVGLSSSL QVLVGSPQLN 420 EKTTACEARS QHHDCSTKHG GNSTREAQST WTYRNNEMNC ADRTVPRTVP QPNDHEDCRV 480 SGFAEATNFN DQAGRHQGFR PFSFGTTNHC QGRIIDHAVA ASKHAEVNNS MKSRDVNLYS 540 RLNTISFPIA TANNETSTAL NDGKQSSGVA SRRTAAVVSE RHGGQVVRHP RTASSVYMPE 600 QGPGWL |
Link Out ? help Back to Top | |
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Ensembl | OGLUM08G19580.6 |