PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM08G16460.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 334aa    MW: 36479.2 Da    PI: 5.8503
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM08G16460.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1522.8e-4771401127
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvka...eekewyfFskrdkkyatgkrknratksgyWkat 86 
                      lp+GfrF Ptdeelv++yL++k+ + +++   +i++vd+y+++Pw+Lp      +  +   + +e+yfF++r++ky++g r +rat+ gyWk+t
  OGLUM08G16460.1   7 LPAGFRFFPTDEELVTYYLARKAMDATFTS-AAIRDVDLYTSDPWHLPCdssaaS--TgggGGSECYFFCRRSSKYPSGARVRRATAGGYWKST 97 
                      799************************999.78**************94355441..1344667****************************** PP

              NAM  87 gkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127
                      gkdk v+++  +g lvg+kktLvfy+grap+gekt+Wvmhey+
  OGLUM08G16460.1  98 GKDKGVYAAggGGGLVGTKKTLVFYEGRAPRGEKTSWVMHEYS 140
                      ********9877889***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MEEEQRLPAG FRFFPTDEEL VTYYLARKAM DATFTSAAIR DVDLYTSDPW HLPCDSSAAS  60
TGGGGGSECY FFCRRSSKYP SGARVRRATA GGYWKSTGKD KGVYAAGGGG GLVGTKKTLV  120
FYEGRAPRGE KTSWVMHEYS RAPSTNFIRG AQARLNDAAG FDRHLFVSEW VICRVFKKQP  180
PIEHWLEMEQ EVETTTTTTV QEHTPNRRRL PPAEAAAAAP PPSGQPWQHT SRRSGDGRAA  240
IDGGNREEED EHGLAREESS SPVVISSPSR CTSSPSSRLL NHEHLGASSS DDLPELMEFG  300
DIYGGIAAGG PTDQQASSSN SNSICNFLDE PYYC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.26e-41NAC family protein