PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM08G16400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 352aa MW: 36732.1 Da PI: 6.2329 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.8 | 1.1e-14 | 130 | 176 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h+e+ErrRR+riN +++Lr+llP+ +K +Ka+ L +++e++k+L OGLUM08G16400.1 130 RSHSEAERRRRQRINGHLARLRSLLPNT-----TKTDKASLLAEVIEHVKEL 176 78*************************9.....8****************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 352 aa Download sequence |
MWEAVGGGDG TALLPWPGSA AAATTSGAAA PLYMPPVAAA AAPFAAGEQL PVEQPFYFDG 60 GGGVAGHNHH PHHHQYGMEA PPPMTMMQMG GGGSSSSRMV VSGLLGTLQA ELGRMTAKEI 120 MDAKALAASR SHSEAERRRR QRINGHLARL RSLLPNTTKT DKASLLAEVI EHVKELKRQT 180 SAMMEDGAAG GEAAAAPVVL LPTEDDELEV DAAADEGGRL VARASLCCED RADLIPGIAR 240 ALAALRLRAR RAEIATLGGR VRSVLLIAAV EEEDPDEAGN DDDDEHGYGV AASHRRHELV 300 ASIHEALRGV MNRKAASSDT SSSSAGGGGG SIKRQRMISA HDHQGSFNSS GW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G68810.1 | 7e-39 | bHLH family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM08G16400.1 |