PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM08G07550.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 364aa    MW: 38341.5 Da    PI: 11.2728
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM08G07550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.49.4e-31297355259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D+y+WrKYGqK++kgs++pr+YYrC++  gCp++k+ver+a+dp ++++tYeg+H+h+
  OGLUM08G07550.1 297 ADEYSWRKYGQKPIKGSPYPRGYYRCSTVkGCPARKHVERAADDPATLVVTYEGDHRHS 355
                      69************************9888****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MNRIPLFKTL FSVLQPYTTQ ATSPTPFPPH NLTLTTSSSS STTGNSSSGV RSRLRLRRPM  60
AVDLMGFSPR GGCRPSVETE QLAFQEAAAA GLRSLELLVS SLSAGGEQHR RPQQKQSSPP  120
LGEIADQAVS RFRKVISILD RTGHARFRRG PVVGAAAAAA SASPSSSPVS PPLPPVTTQP  180
ATAVKSLTLD FTNPAKVAAA SVTSTSFFSS VTAGGDGSVS KGRSLVSSGK PPLAGGVKRK  240
HHPNPHPHPP CAAGGDGHGH GAAHAHGGCH CSKKRKQRVR RTVRVAAASA RVADIPADEY  300
SWRKYGQKPI KGSPYPRGYY RCSTVKGCPA RKHVERAADD PATLVVTYEG DHRHSPPPPP  360
LPLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.21e-51WRKY family protein