PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM08G03540.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NAC | ||||||||
Protein Properties | Length: 701aa MW: 77804.9 Da PI: 4.4728 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.5 | 2.2e-52 | 9 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lp GfrFhPtdeelv +yLk k++g+ +++evi+e+d++k+ePwdLp k +++++ ew+fF+++d+ky++g+r+nrat++gyWkatgkd+ + OGLUM08G03540.1 9 LPLGFRFHPTDEELVRHYLKGKITGQIRSEAEVIPEIDVCKCEPWDLPdKsLIRSDDPEWFFFAPKDRKYPNGSRSNRATEAGYWKATGKDRVI 102 699************************99999***************96446677888************************************ PP NAM 93 lsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 sk k++++g+kktLvf++grapkge+t W+mheyr OGLUM08G03540.1 103 RSKgdkkKQQVIGMKKTLVFHRGRAPKGERTGWIMHEYRT 142 **988777777***************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 701 aa Download sequence |
MAVMELKKLP LGFRFHPTDE ELVRHYLKGK ITGQIRSEAE VIPEIDVCKC EPWDLPDKSL 60 IRSDDPEWFF FAPKDRKYPN GSRSNRATEA GYWKATGKDR VIRSKGDKKK QQVIGMKKTL 120 VFHRGRAPKG ERTGWIMHEY RTTEPEFESG EQGGYVLYRL FRKQEEKIER PSPDEVDRSG 180 YSPTPSRSTP DNMEPIEDGN TPLNRESPES ALHESPIDLP ALTEAQAAPI TRWLADRTDN 240 ATTNEVNISH MPHHGLDGGA KASPSAGAFP QLIGSQQNIH DNNELATVSA PMLPHEDFNN 300 FPLGAIGNFD GNMNPRDPVE EFLNQTIADP DEHSSTTSKA QYDSDTGIIP TEFENHGVMQ 360 GEFMDDLSGL ENLDFWPDDR NPQLSALYED TLLLHSTDQD VLSMDSGAES LQDLFNSMDD 420 SNARNNVWGN EPFLQGTGFP MSWPLQPNSA FPNQGTANKR LMLQLSESLS PDFDASMTRD 480 ECEDEEPGIV VTSKYVNEAP EESTAEKDMP SDGDDAEPTG ITILRRRHAP TANDAESTGI 540 TILRRRQAPT ASSASSFTQQ GAAVRRVRLQ SNLDAAPCSS VDGSSSCIIN EGESERTMEK 600 PEIEENAGST LAEGGTCHED DQKEHDASAA NAKSVLRLRK TAEGSDKENK QEEEEGVLDS 660 HVRAPGNKRG FPWYIIWLVL SVALVLLISL GIYGWDTLKE S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 3e-70 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM08G03540.1 |