PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G26710.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 478aa MW: 50967.4 Da PI: 5.4695

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G26710.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.5	6.9e-39	106	165	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rn+PvG+grrk+k+s OGLUM07G26710.1 106 PDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKSCQRYWTAGGSMRNLPVGAGRRKSKSS 165 7899*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MDDLAAASPP HPPPPPPPPE SHVPPPPQTP EKDSCEDTGD MRISEEKPCT DQELDADQTN 60 SSSFNSSSEC ENQTPSNDEM TGSESKSEAA QTEGGGSSED KVLKKPDKIL PCPRCNSMDT 120 KFCYYNNYNI NQPRHFCKSC QRYWTAGGSM RNLPVGAGRR KSKSSTANYR SILITGSNLA 180 APAGDAPLYQ LSIKGDQTAT AVKFAPDSPL CNSMASVLKI GEQSKNAKPT STAQPRNGET 240 QTCPASGTTS DSPRNEPVNG AVSGHQNGIV GHSGVPPMHP IPCFPGPPFV YPWSPAWNGI 300 PAMAPPVCTA PAEPANSSDN GSTASVQWSM PPVMPVPGYF PVIPSSVWPF ISPWPNGAWS 360 SPWIQPNCSV SASSPTSTST CSDNGSPVLG KHSRDSKPQG DDKAEKNLWI PKTLRIDDPD 420 EAAKSSIWTT LGIEPGDRSM FRSFQSKPES REQISGAARV LQANPAALSR SQSFQETT

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MDDLAAASPP HPPPPPPPPE SHVPPPPQTP EKDSCEDTGD MRISEEKPCT DQELDADQTN  60
SSSFNSSSEC ENQTPSNDEM TGSESKSEAA QTEGGGSSED KVLKKPDKIL PCPRCNSMDT  120
KFCYYNNYNI NQPRHFCKSC QRYWTAGGSM RNLPVGAGRR KSKSSTANYR SILITGSNLA  180
APAGDAPLYQ LSIKGDQTAT AVKFAPDSPL CNSMASVLKI GEQSKNAKPT STAQPRNGET  240
QTCPASGTTS DSPRNEPVNG AVSGHQNGIV GHSGVPPMHP IPCFPGPPFV YPWSPAWNGI  300
PAMAPPVCTA PAEPANSSDN GSTASVQWSM PPVMPVPGYF PVIPSSVWPF ISPWPNGAWS  360
SPWIQPNCSV SASSPTSTST CSDNGSPVLG KHSRDSKPQG DDKAEKNLWI PKTLRIDDPD  420
EAAKSSIWTT LGIEPGDRSM FRSFQSKPES REQISGAARV LQANPAALSR SQSFQETT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	3e-81	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G26710.1