PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OGLUM07G24220.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 568aa MW: 60177.7 Da PI: 5.374

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G24220.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.4	4.2e-15	113	173	3	63
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e kr r+ +NRe+A sRqRKk+++eeLe kvk+++a +L +++ + e a+lk+++ OGLUM07G24220.1 113 EAKRRARLVRNRESAHQSRQRKKQYVEELEGKVKVMQATIADLTARISCVTAENAALKQQL 173 78********************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MAEPDLLAPF ADLPFPPGDD FPDFPALGDD AFALEDFDLE DLDFDFDVDL FPPDAPPPVT 60 TSSSSAAGSP EAGTSSTGDG GSKNEESADS SSPSRSGSDG GGGGSGKDGK DDEAKRRARL 120 VRNRESAHQS RQRKKQYVEE LEGKVKVMQA TIADLTARIS CVTAENAALK QQLSGTADAG 180 AATLPPPMPM YPAVYPLPMP WIHPAYAMRG SQVPLVPIPR LKTQLPASTP EPPAKKARKT 240 KKVAGVSLLG LLFLMMVCGC LVPAVNRMYG AAYTGEGAAI VPSHHGRILA VEGPQNSVSN 300 GVDPKVPQNG SETLPALLYL PRNGKHVKIN GNLVIKSIVA SEKASSRLSN YGGKGSGNQE 360 KEETSLAIPG YVAPLEAGEV MDSAFNELMA LAPGDGSIYR EDDGMLPQWF SEAMSGPMLN 420 SGMCTEVFQF DLSPTTADAN GIVPVYSGSV TNTSQNYTEN LPSGPVQKVK NRRISYSEAI 480 PLRGSISNDT DHFKAPPKNH SQSHAGRKPV SSVVVSVLAD PREASDRDGE GRISSNSVSR 540 IFVVVLIDSV KYVTYSCVLP FKSHSPHL

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MAEPDLLAPF ADLPFPPGDD FPDFPALGDD AFALEDFDLE DLDFDFDVDL FPPDAPPPVT  60
TSSSSAAGSP EAGTSSTGDG GSKNEESADS SSPSRSGSDG GGGGSGKDGK DDEAKRRARL  120
VRNRESAHQS RQRKKQYVEE LEGKVKVMQA TIADLTARIS CVTAENAALK QQLSGTADAG  180
AATLPPPMPM YPAVYPLPMP WIHPAYAMRG SQVPLVPIPR LKTQLPASTP EPPAKKARKT  240
KKVAGVSLLG LLFLMMVCGC LVPAVNRMYG AAYTGEGAAI VPSHHGRILA VEGPQNSVSN  300
GVDPKVPQNG SETLPALLYL PRNGKHVKIN GNLVIKSIVA SEKASSRLSN YGGKGSGNQE  360
KEETSLAIPG YVAPLEAGEV MDSAFNELMA LAPGDGSIYR EDDGMLPQWF SEAMSGPMLN  420
SGMCTEVFQF DLSPTTADAN GIVPVYSGSV TNTSQNYTEN LPSGPVQKVK NRRISYSEAI  480
PLRGSISNDT DHFKAPPKNH SQSHAGRKPV SSVVVSVLAD PREASDRDGE GRISSNSVSR  540
IFVVVLIDSV KYVTYSCVLP FKSHSPHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	5e-77	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G24220.1