PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G19920.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

WRKY

Protein Properties

Length: 618aa MW: 66123.5 Da PI: 6.4225

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G19920.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.2	6.3e-32	236	293	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C vkk +ers d++++e++Y+g+Hnh+k OGLUM07G19920.1 236 EDGYNWRKYGQKHVKGSENPRSYYKCTHPNCDVKKLLERSL-DGQITEVVYKGRHNHPK 293 8**************************************.*************85 PP
2	WRKY	106.4	1.5e-33	409	467	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++dpk v++tYeg+Hnhe OGLUM07G19920.1 409 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNTGCPVRKHVERASHDPKSVITTYEGKHNHE 467 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MADSPNPSSG DHPAGVGGSP EKQPPVDRRV AALAAGAAGA GARYKAMSPA RLPISREPCL 60 TIPAGFSPSA LLESPVLLTN FKVEPSPTTG TLSMAAIMNK SANPDILPSP RDKTSGSTHE 120 DGGSRDFEFK PHLNSSSQST ASAINDPKKH ETSMKNESLN TAPSSDDMMI DNIPLCSRES 180 TRAVNVSSAP SQLVGMVGLT DSSPAEVGTS ELHQMNSSGN AMQESQPESV AEKSAEDGYN 240 WRKYGQKHVK GSENPRSYYK CTHPNCDVKK LLERSLDGQI TEVVYKGRHN HPKPQPNRRL 300 SAGAVPPSQG EERYDGVATT DDKSSNVLSI LGNAVHTAGM IEPVPGSASD DDNDAGGGRP 360 YPGDDAVEDD DLESKRRKME SAAIDAALMG KPNREPRVVV QTVSEVDILD DGYRWRKYGQ 420 KVVKGNPNPR SYYKCTNTGC PVRKHVERAS HDPKSVITTY EGKHNHEVPA SRNASHEMST 480 PPMKPVVHPI NSNMQGLGGM MRACEPRTFP NQYSQAAESD TISLDLGVGI SPNHSDATNQ 540 LQSSVSDQMQ YQMQPMGSVY SNMGLPAMAM PTMAGNAASS IYGSREEKPS EGFTFKATPM 600 DHSANLCYST AGNLVMGP

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MADSPNPSSG DHPAGVGGSP EKQPPVDRRV AALAAGAAGA GARYKAMSPA RLPISREPCL  60
TIPAGFSPSA LLESPVLLTN FKVEPSPTTG TLSMAAIMNK SANPDILPSP RDKTSGSTHE  120
DGGSRDFEFK PHLNSSSQST ASAINDPKKH ETSMKNESLN TAPSSDDMMI DNIPLCSRES  180
TRAVNVSSAP SQLVGMVGLT DSSPAEVGTS ELHQMNSSGN AMQESQPESV AEKSAEDGYN  240
WRKYGQKHVK GSENPRSYYK CTHPNCDVKK LLERSLDGQI TEVVYKGRHN HPKPQPNRRL  300
SAGAVPPSQG EERYDGVATT DDKSSNVLSI LGNAVHTAGM IEPVPGSASD DDNDAGGGRP  360
YPGDDAVEDD DLESKRRKME SAAIDAALMG KPNREPRVVV QTVSEVDILD DGYRWRKYGQ  420
KVVKGNPNPR SYYKCTNTGC PVRKHVERAS HDPKSVITTY EGKHNHEVPA SRNASHEMST  480
PPMKPVVHPI NSNMQGLGGM MRACEPRTFP NQYSQAAESD TISLDLGVGI SPNHSDATNQ  540
LQSSVSDQMQ YQMQPMGSVY SNMGLPAMAM PTMAGNAASS IYGSREEKPS EGFTFKATPM  600
DHSANLCYST AGNLVMGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-124	WRKY family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G19920.1