PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM07G18530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | B3 | ||||||||
Protein Properties | Length: 958aa MW: 106036 Da PI: 8.3113 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59 | 8.1e-19 | 456 | 555 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e+ OGLUM07G18530.1 456 FEKMLSASDAGRIGRLVLPKKCAEAYfpAISQAEGLPLKVQDATGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PEG 547 89**************************777788889***************9989999999***9.********************987.777 PP ..EEEEE- CS B3 91 elvvkvfr 98 +lv+++++ OGLUM07G18530.1 548 KLVMGFRK 555 77777776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 958 aa Download sequence |
MSSPAQPPPT RPPVAAPPPS LAAAAPISVQ PPPLQPKPPP HPQQPPQAVV SVGVGPPPPT 60 PQHQQQQQQQ QGPPGHAPPQ QRPRICFNAH CKDPKSDGPR RRGWRLRNGD FAELCDRCYH 120 SFEHGGFCET FHLEVAGWRN CESCGKRLHC GCIVSVHAFV HLDAGGVECV MCARKSHAAM 180 APSQIWSSSM HMAQNVADRK DNFVKSWRPP AGQFSSQWRQ NNMWSMSTMQ SDLQQRLAFE 240 FDRPSGSEKL LPGRTFIHAH EKKFDDMHDR STTPAGMNQI MRERYANGHT QHTTLDPTYA 300 YTLYHREGTN PNLHDHSHHA GENDHLTARK GVTSDSCSSV STTFKLDSHH PSILKDDPSA 360 VPAGLSPNFS SANGPKDHIR IGPTQQQQQM ASSSLQKQFY SHSVIDNDFQ AQLRNGRPRM 420 DAKARSQLLP RYWPRITDQE LQHLSGDSNS VITPLFEKML SASDAGRIGR LVLPKKCAEA 480 YFPAISQAEG LPLKVQDATG KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF 540 SRIDPEGKLV MGFRKATNLS AEQDQPTKPA NGVPPPPEAN NKVVVPDSSP NAAVPRPIKV 600 NTESKSSSPV EQATACKIDK GALPQKEGPG TSSSSPLPVK RKATSVGPKI KRFRMDSEES 660 MELKITWEEA QELLRPPPKA PSIVVVDGHE FEEYEEPPIL GRRTYFVTDQ SGENHQWAQC 720 EDCSKWRKLP VDALLPSKWT CSDNKWDSER SSCDSAQEIN MEELGEMIPI KPGAAKKTKG 780 KVDTDNIDVS DGLDTLANLA ILGEGESLPS QPTTRHPRHR PGCSCIVCIQ PPSGKGPKHK 840 QTCTCNVCMT VRRRFRTLMM RREKRQQSEK DSGVPRKREP GQSSEPVPQS GSGAHPTSTS 900 SPPPRADTNG EGPEDMSIDN KRTSSPVKNQ IDLNSQPERE DEQSPKSDAT RLLRDNPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32010.1 | 1e-142 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM07G18530.1 |