PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM07G11600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | HB-other | ||||||||
Protein Properties | Length: 231aa MW: 26358.2 Da PI: 5.6468 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.2 | 4.5e-21 | 56 | 107 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++t++q++ Le++Fe++ y+ ++r eLAkklg++erqVk+WFqNrR+++k OGLUM07G11600.1 56 KRHTDDQIKHLESVFERCTYLGGNQRVELAKKLGMEERQVKFWFQNRRTRKK 107 579***********************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MDNGSQQESS DLHVHHLPIA SVIGVEDHTE EADDAAVDYH DDGSEGQDEV SNKRMKRHTD 60 DQIKHLESVF ERCTYLGGNQ RVELAKKLGM EERQVKFWFQ NRRTRKKMHD ERQEGMWLQE 120 ENDVLHAENK VLKEAIWANI CFTCGSPVVP AIPTVHHRYL SFQNMRLADE LQHATAVFNM 180 VAQDADVGLP PVFPLTDVSP LPQFGFVTGN NQTSLEQHHG KDQQHASNGK W |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61150.1 | 3e-31 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM07G11600.1 |