PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G07750.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 333aa    MW: 35962.3 Da    PI: 5.1086
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G07750.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM79.95.3e-2591481128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk...dk 90 
                      lppG+rF+P+d+elv +yL ++++g++l+l+ v+ ++d ++++Pw+L + +  + +e +f ++++ k+a+gkr++r +   g+W+ +      k
  OGLUM07G07750.1   9 LPPGLRFDPSDDELVGRYLLRRLQGQPLPLDGVVLDADPLSAQPWRLLADHGRGGDEAFFLAEAHAKNAKGKRQKRtVEGGGFWQGQRMcvdGK 102
                      79****************************999**************877777889********************555599**9765533234 PP

              NAM  91 evlsk..kgel..........vglkktLvfykgrapkgektdWvmheyrl 128
                      ++l+   +  +           + k +L f+ ++ ++g ++ Wvmhey++
  OGLUM07G07750.1 103 KLLVPgdD--DgggggevleiAWRKYVLSFF-AEGERG-SSGWVMHEYSV 148
                      44444550..24555666787899999****.444454.89*******86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MAAAGADGLP PGLRFDPSDD ELVGRYLLRR LQGQPLPLDG VVLDADPLSA QPWRLLADHG  60
RGGDEAFFLA EAHAKNAKGK RQKRTVEGGG FWQGQRMCVD GKKLLVPGDD DGGGGGEVLE  120
IAWRKYVLSF FAEGERGSSG WVMHEYSVTA PADLASSPLR LYRIRFSGYG KKRKRESEDD  180
GRAHGAPRRA EAETALFDLE VGPPPPPLLV PPPAAAAADH GTDQSSSGVT DMVFRDLPDL  240
IADAGAALPD QNQQDWSEVA DQSSFCVMGD DSSLLLPDLP GMIDDNEHQQ FVARVRHATP  300
VRPASRGSHC WWWCSIGAIG GQPELRGHGI VRF