PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G07280.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 276aa    MW: 30891.9 Da    PI: 6.4107
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G07280.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.61.7e-51171421128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      lppGfrFhPtdeelv +yL+++++g+  ++  +i+e+d+y+++PwdLp+++  +++ewyfF++rd+ky++g+r+nra++sgyWkatg dk+vl+
  OGLUM07G07280.1  17 LPPGFRFHPTDEELVAHYLCPRAAGRAAPV-PIIAELDLYRHDPWDLPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLH 109
                      79*************************999.88***************87778999************************************** PP

              NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +g++ g+kk Lvfy+g+ p+g+kt+W+mheyrl
  OGLUM07G07280.1 110 -NGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRL 142
                      .999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MAAAKRRVRD AEADLNLPPG FRFHPTDEEL VAHYLCPRAA GRAAPVPIIA ELDLYRHDPW  60
DLPHRALFGR REWYFFTPRD RKYPNGSRPN RAAASGYWKA TGADKPVLHN GRTAGIKKAL  120
VFYHGKPPRG VKTEWIMHEY RLAKKGGAAA AAGAGALRLD DWVLCRLYNK KNEWEKMQSR  180
KEEEEAMAAA QSWGETRTPE SEVVDSDAFQ EMDYSLPAAS FDDALLPKEE ARDDDWLMGM  240
SLDDLQGLGS LLQADDLSML APPPAAKTEP LGAPFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.13e-78NAC family protein