PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G01370.2
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family YABBY
Protein Properties Length: 405aa    MW: 43454.2 Da    PI: 9.8004
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G01370.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY38.83.4e-121812132355
            YABBY  23 avsvPstslfkvvtvrCGhCtsllsvnlakasq 55 
                      +vsvPs+slfk+vtvrCGhC+sll+vn+     
  OGLUM07G01370.2 181 IVSVPSSSLFKTVTVRCGHCSSLLTVNIGGLLL 213
                      69*************************987665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
MEPWRQGGAV GCGRRPAGEQ LGTGVGSTRR RRPHPQPLPF PPASATSVFA CHCRMVDPTS  60
RMRIRPARDG HIAAVVDASN GSESWAAASA EEHPSSRSDE QSEEADEDGD GNAEAVGAAV  120
LLFSPPPPAV AAATLLLFLS SDAAAAAGTR SNFFRTEDGN IGFRSKGEAE ITAAAAPPRR  180
IVSVPSSSLF KTVTVRCGHC SSLLTVNIGG LLLLPTSATA PPPPPPPPPP AATHFPHSLN  240
LAPPANPPHH HSLLDEISTA CSPTQLLLEQ HGLGGLMASA ASCRNNNVCR NNKKMIAFLR  300
WALHPPSFFR ARDSKKLVAF ISGVPARIRA RDDVVRMAVI NFPCVHKKLR SKREERREEG  360
REEGKKNMTW HHNMWDPRGF YANSTVTWDK TGVNTTLGSR VTGFV