PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM06G21530.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | MYB | ||||||||
Protein Properties | Length: 564aa MW: 61987.7 Da PI: 5.9856 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.8 | 1.2e-18 | 172 | 219 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l ++v+ +G g+W+++ r g++R++k+c++rw ++l OGLUM06G21530.2 172 KGPWTPDEDKRLREYVEAHGEGNWNRVQRNAGLNRCGKSCRLRWANHL 219 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 42 | 2.1e-13 | 225 | 268 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+e +++++ lG++ W++ a+ ++ gRt++++k++w++ OGLUM06G21530.2 225 KGPFSKEEEEMIIKLHLWLGNK-WAKMANSLP-GRTDNEIKNFWNT 268 79********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 564 aa Download sequence |
MQPDSTDRLA GRHAGCSERA ADTKQMIIFR KFTTKSKKHS MQYCKPRLHS PFRPRTRAIV 60 IGGPLLLASS SLLRLVYYST SLSAAAAAAH LVSTPGSSPM EEEEAARLAG SQGESPAMLH 120 PNGDGDGDGD GGDDEGDASG GEEEQGGVAR AGVRRRGGGG RVRVRGRIPL KKGPWTPDED 180 KRLREYVEAH GEGNWNRVQR NAGLNRCGKS CRLRWANHLK PDLKKGPFSK EEEEMIIKLH 240 LWLGNKWAKM ANSLPGRTDN EIKNFWNTRC KRIQRTGEPL YPKEFNHFKL TDLEVMNCES 300 PDESRAKKRT NEVLQGNGQS YKEVFFNNLD YSRPENYIRP NCVTPNSLPV DATSPFGSAI 360 ATQDQSVPFG SAIVSGHPIL DGNFSTSGTI QRPMNVELPS LQYPNYDFNN NNAWSYHDPL 420 GHPIDQVDFG SLRSEYLSPN NNGLLDALVH GGHGQGELAN SQGSFDACFP RVQCNQVIQS 480 NAFSLSSSFP IIGDDLLENI YCQFNEELPP SNEQFAKDAD DAFGHGGLSD ETNLAAAGQG 540 DEHDLENPWA SMPGACDIPD FPSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G32460.2 | 5e-55 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM06G21530.2 |