PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM06G05410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | MYB_related | ||||||||
Protein Properties | Length: 239aa MW: 26378.8 Da PI: 7.9532 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.2 | 5.2e-10 | 190 | 237 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +W + E+e l ++v+q+G+g+Wk I + gR + ++k++w++ OGLUM06G05410.1 190 KWCALEEETLRKGVEQYGNGNWKDILTNNPdvfIGRKAMDLKDKWRNM 237 68888****************************99***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MAAERIVGDG AIETWRAADE VTRAKYRLLA GEQRAREIEG KLGETIPQGN QISTPEVHKV 60 MDALKSSCAN LHCVVEDPLP AAKAAADEVL AARMDKAVDL NAGEVSNQPT ACDIAGPSAP 120 ADNLDAPRKG TAASLMDWNP TARTFQWEDS PDPDGSRSPI HRPQLPSPRR TTFSPLQPAD 180 NKAKRRKARK WCALEEETLR KGVEQYGNGN WKDILTNNPD VFIGRKAMDL KDKWRNMMR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15720.1 | 2e-12 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM06G05410.1 |