PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OGLUM05G22440.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 330aa MW: 37128 Da PI: 8.6612

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM05G22440.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33	1.3e-10	47	88	5	46
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L+ OGLUM05G22440.1 47 KTLRRLAQNREAARKSRLRKKAYVQQLEDSRMKLTQLEQELQ 88 6789************************99888888776654 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MVYASPGTDA STDPDIDKNI RMFEQGDPPT PIAYCPRDKS KGKLGQKTLR RLAQNREAAR 60 KSRLRKKAYV QQLEDSRMKL TQLEQELQRA RQQGIIISTS GDQQRSTSEN EALAFNMEYM 120 RWLEEHNKQI NELRSAVHTH AGDDDLQSIV SSVMAHHEEI FRIKGLAAKA DALHVLSATW 180 RTPLERCFLW LGGFRPSDLL KLLADQLEPL TEQQLASIYN QQQSSQQAEE TLSQGMEIIQ 240 DSLAKTVASQ LGRAGSSSPS NAADHTAAAL GKIGDMESLL QQADDLRMQS LQKMQRVLTT 300 RQSARALLLV SDYFSRLRAL NSLWIARPQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06950.4	1e-126	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM05G22440.1