PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM05G12590.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 567aa MW: 60410.6 Da PI: 3.8077

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM05G12590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	78.7	1.3e-24	7	146	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWk..atgkdke 91 l pG++F+P+d++lv +yL ++++g++l+l+ vi e+d +++ Pw+L + +++ +e +fF++++ k+ +gkr++r + g+W+ +t d e OGLUM05G12590.1 7 LLPGLKFDPSDHDLVGRYLLRRLQGQPLPLDGVILEADPLSAPPWKLLAD-HGRGDEAFFFAEAHAKNGKGKRQKRtVEGGGFWQgqKTCVDGE 99 579*************************999**********743.456789***************5555999334444555 PP NAM 92 vlsk.........kgel.....vglkktLvfykgrapkgektdWvmheyrl 128 l+ + + k +L f+ + ++g ++ Wvmhey++ OGLUM05G12590.1 100 RLCVpddgdgsggG--GggleiAWRKYVLSFFA-NGERG-SSGWVMHEYAV 146 44445666655550..055565899999**4.44444.89*****86 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MAAADGLLPG LKFDPSDHDL VGRYLLRRLQ GQPLPLDGVI LEADPLSAPP WKLLADHGRG 60 DEAFFFAEAH AKNGKGKRQK RTVEGGGFWQ GQKTCVDGER LCVPDDGDGS GGGGGGLEIA 120 WRKYVLSFFA NGERGSSGWV MHEYAVTAPD GLASSQLRLY RVRFSGYGKK RKREPQCPGA 180 HGDDDGELQR APPPRSMAET ALLEERGPLP HPVLGPASVV DQCTDQGSSG VIDDSSLVFR 240 DLPDLIDLPV AEEADASHGA ETALLNEHLP LPPPQLFVPP TAVPLDLADD SDGADQNSYG 300 MMGDDQLLLP DLPGTINDDM PDLFVSQAEE ASAVPAISYH SSGFMGNEVA ALSDFELPES 360 YSSSDAMDGE ALALSNYEFP ESFEEDLSCI DFATANASSL GFPMDGYPMD ELFDDMPDQG 420 SSGAMDDSSV VFRDLPGLIN LPPAEEADAI GDAETALLRD LADDSNGTDR NSYGVMGDDQ 480 DRLLLPEIPR RIDMPDLFVS QAEEAGLGGG AALDSSSGAM DGEALALSDF EFPESVEEVL 540 SCMDFSTVDM SCLDVPIDEL LDDLPAD

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MAAADGLLPG LKFDPSDHDL VGRYLLRRLQ GQPLPLDGVI LEADPLSAPP WKLLADHGRG  60
DEAFFFAEAH AKNGKGKRQK RTVEGGGFWQ GQKTCVDGER LCVPDDGDGS GGGGGGLEIA  120
WRKYVLSFFA NGERGSSGWV MHEYAVTAPD GLASSQLRLY RVRFSGYGKK RKREPQCPGA  180
HGDDDGELQR APPPRSMAET ALLEERGPLP HPVLGPASVV DQCTDQGSSG VIDDSSLVFR  240
DLPDLIDLPV AEEADASHGA ETALLNEHLP LPPPQLFVPP TAVPLDLADD SDGADQNSYG  300
MMGDDQLLLP DLPGTINDDM PDLFVSQAEE ASAVPAISYH SSGFMGNEVA ALSDFELPES  360
YSSSDAMDGE ALALSNYEFP ESFEEDLSCI DFATANASSL GFPMDGYPMD ELFDDMPDQG  420
SSGAMDDSSV VFRDLPGLIN LPPAEEADAI GDAETALLRD LADDSNGTDR NSYGVMGDDQ  480
DRLLLPEIPR RIDMPDLFVS QAEEAGLGGG AALDSSSGAM DGEALALSDF EFPESVEEVL  540
SCMDFSTVDM SCLDVPIDEL LDDLPAD

Link Out ? help Back to Top
Ensembl	OGLUM05G12590.1