PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G03850.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GATA
Protein Properties Length: 64aa    MW: 6427.28 Da    PI: 8.5134
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G03850.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.81.1e-163159129
             GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGly 29
                     C+ Cg+t+Tp+WR gp g ++LCnaCG++
  OGLUM05G03850.1 31 CVECGATTTPMWRGGPTGRRSLCNACGIR 59
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 64 aa     Download sequence    
MGSSDQKVIG IAAAAAAAAA AEEEEAGRRC CVECGATTTP MWRGGPTGRR SLCNACGIRR  60
GGKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26930.13e-14GATA family protein