PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM05G02640.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 539aa MW: 56689.5 Da PI: 6.4723 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.9 | 3.7e-13 | 374 | 414 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +rRRdriN+++ L+el+P++ K +Ka++Le+A+eY+k Lq OGLUM05G02640.3 374 QRRRDRINEKMRALQELIPNC-----NKIDKASMLEEAIEYLKTLQ 414 79******************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 539 aa Download sequence |
MLRGNDTGSD LAELLWDNGS PAPLRPPPPP PFQPFTCSAA ATTSPPAHDY LFIKNLMRGG 60 GAANHHHHDD DDDDDDVPWL HYHPVVDDDA DADADTAPLP PDYCAALLSG LSDHLPPPAA 120 AASREDPDPC SSSHGAVVPS TSAAAAKQAR TSGGGGGGVM NFTFFSRPLQ QRPSGGETAS 180 ASASAAATST VPVESTVVQA ATNRLRSTPL FSDQRMAWLH PPKPSPRTAA PPPPPPLAPT 240 TRHRLDTAAA TATVAQRLPP SEARAPDAPP PAATATATTS SVCSGNGDRS QLNWRDSHNN 300 QSAEWSASQD ELDLDDELAG VHRRSAARSS KRSRTAEVHN LSERVSTHTM HHPQHPRRVM 360 TSSHLAIELL SSSQRRRDRI NEKMRALQEL IPNCNKIDKA SMLEEAIEYL KTLQLQVQMM 420 SMGTGMFVPP MMLPAAAAAA AAMQHHHMQM QQMAGPMAAA AHFPHLGAAA AMGLAGFGMP 480 AAAQFPCPMF PAAPPMSMFA PPPPPPPLPF PHAAATAVEQ TPSPPGAADA GDAPAVKQA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09530.2 | 3e-25 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM05G02640.3 |