PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM05G00930.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 352aa MW: 36399.6 Da PI: 8.5766

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM05G00930.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.2	3.2e-37	100	158	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e lkcprCdstntkfCy+nnyslsqPr+fC+aCrryWt+GGalrnvPvGgg r++ k+ OGLUM05G00930.1 100 EPGLKCPRCDSTNTKFCYFNNYSLSQPRHFCRACRRYWTRGGALRNVPVGGGYRRHAKR 158 56789************************************************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MIFPPAFLDS SSWNDNNNNN HNQQQQQQHA HGHHQHHQVA AGCGGGGGGG GDGNSHELLQ 60 QQSMIPGTLA DGGGGGGAVG PAKPMSMSER ARLARIPLPE PGLKCPRCDS TNTKFCYFNN 120 YSLSQPRHFC RACRRYWTRG GALRNVPVGG GYRRHAKRAK PKPASAAGSA SAATTTAGST 180 PAGSTTTTTS STCATPNAPA LPAMLGGNLS ILPPLLRLAD FDAMSLGSTF SGMAAAAGKP 240 PPVDAAGCYS VGAATGLEQW RLQQMQSFPF FHAMDHQAAM AAPPPAMAMP GMFQLGLDGD 300 GHGGGGGEDG GELHHAMPSS KREGYPRGMY GDHHLAGGYT SYSSATTGNH LL

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MIFPPAFLDS SSWNDNNNNN HNQQQQQQHA HGHHQHHQVA AGCGGGGGGG GDGNSHELLQ  60
QQSMIPGTLA DGGGGGGAVG PAKPMSMSER ARLARIPLPE PGLKCPRCDS TNTKFCYFNN  120
YSLSQPRHFC RACRRYWTRG GALRNVPVGG GYRRHAKRAK PKPASAAGSA SAATTTAGST  180
PAGSTTTTTS STCATPNAPA LPAMLGGNLS ILPPLLRLAD FDAMSLGSTF SGMAAAAGKP  240
PPVDAAGCYS VGAATGLEQW RLQQMQSFPF FHAMDHQAAM AAPPPAMAMP GMFQLGLDGD  300
GHGGGGGEDG GELHHAMPSS KREGYPRGMY GDHHLAGGYT SYSSATTGNH LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	2e-45	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM05G00930.1