PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM05G00490.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | C2H2 | ||||||||
Protein Properties | Length: 405aa MW: 44866.9 Da PI: 8.3353 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11 | 0.0013 | 93 | 115 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ +Cgk+F + L++H +H OGLUM05G00490.1 93 CSyeNCGKTFVDVAALRKHAHVH 115 77779**************9887 PP | |||||||
2 | zf-C2H2 | 18.5 | 5.4e-06 | 120 | 144 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ Cgk F ++s LkrH H OGLUM05G00490.1 120 YICQepGCGKKFVDSSKLKRHHLIH 144 889999***************9988 PP | |||||||
3 | zf-C2H2 | 18.9 | 4.2e-06 | 150 | 174 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp Cgk Fs nL++H++tH OGLUM05G00490.1 150 FICPhpGCGKAFSLDFNLRSHLKTH 174 789*********************9 PP | |||||||
4 | zf-C2H2 | 16.5 | 2.3e-05 | 180 | 204 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk+F++ s Lk+H + H OGLUM05G00490.1 180 HVCPfpACGKRFTSDSKLKSHVKGH 204 789999***************9988 PP | |||||||
5 | zf-C2H2 | 18.3 | 6.2e-06 | 265 | 290 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+Cp Cgk + +++ L+ H++t H OGLUM05G00490.1 265 YVCPydGCGKAYIHSYKLNLHLKTqH 290 9**********************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence |
MEYAAPAGAG AGAGAGGYYY YPPSQQHKPR RPPRPAARWV KHWIPQDLAT SSGKCALYKW 60 VREDVYKNLK DGKAVPEPEA VKPEPTTEIL FLCSYENCGK TFVDVAALRK HAHVHNERQY 120 ICQEPGCGKK FVDSSKLKRH HLIHTGQKDF ICPHPGCGKA FSLDFNLRSH LKTHALENYH 180 VCPFPACGKR FTSDSKLKSH VKGHEKTGTP ITAQYVPSSD KPQSSSKPAT PATTKPTTPA 240 ATKTTTPAST KPTTPAPTSF AERPYVCPYD GCGKAYIHSY KLNLHLKTQH PEHGQEENGR 300 IAAHASEHAV NDRANQYNYA EIVDLAPNPK RSKTNSGHKT PSSNKAYNVK ISSVLPADIS 360 GVKNQWPGKY EDDSEETEED QGNNIEDGWR YGNQNADDEE TEYED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.1 | 4e-91 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM05G00490.1 |