PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM04G30770.2

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 831aa MW: 93868.3 Da PI: 6.8657

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM04G30770.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.7	2.8e-50	461	589	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppGfrFhPtd el v+yLk+k+ gk+l++ ++++e+d+yk+ PwdLp k +++++++ewyfF++rd+ky++g+r+nr+t++gyWkatgkd++v OGLUM04G30770.2 461 LPPGFRFHPTDVELTVYYLKRKLLGKHLRC-NAVSELDLYKFAPWDLPeKsSLQSKDREWYFFCPRDRKYSSGSRTNRSTEAGYWKATGKDRPV 553 79**************************.89**********95357788999******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + ++++vg+k+tLvf+ g+ p+g +tdWvm eyrle OGLUM04G30770.2 554 IY-NSQTVGMKRTLVFHLGKPPRGDRTDWVMYEYRLE 589 .999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 831 aa Download sequence
MRSSHQPLCT RAHQAAALLL VAATFFLTRL LDRSPLSAPP PPCAAPYSPW PHRDLRIYVY 60 AEDEVDGLRA LLRGRNDDVT AATCIKGQWG TQVKIHQLLL SSRFRTFDKD EADLFFVPTY 120 VKCVRMTGKL NDKEINQTYV KVVLSQMPYF RRSGGRDHIF VFPSGAGAHL FRSWATFLNR 180 SIILTPEGDR TDKRGISAFN TWKDIIIPGN VDDSMVKSDR LAVKPIPLTK RKYLANFLGR 240 AQGKVGRLQL VKLAKQYPDK LESPELKLSG PDKLGRIDYF KHLRNAKFCL APRGESSWTL 300 RFYESFFVEC VPVILSDEVE LPFQNVIDYT EVSIKWPASK IGPGLLEYLE SIPDGRVEEM 360 IGRGREIRCL WVYAADTERC SAMSAIMWEL QRKVRRFHQS AETFWLHNRS IVNRDLVEFH 420 EWRTPHHHLL SAAAPHFLPS PTATTSYRQR SILLSMAKTS LPPGFRFHPT DVELTVYYLK 480 RKLLGKHLRC NAVSELDLYK FAPWDLPEKS SLQSKDREWY FFCPRDRKYS SGSRTNRSTE 540 AGYWKATGKD RPVIYNSQTV GMKRTLVFHL GKPPRGDRTD WVMYEYRLED KELSASGVKL 600 DACVLCKIFQ KSGPGPKIGE QYGAPFNEDD WNEANGELSS FAFSVPPCAL ESSNGRLNTA 660 GQQLAVSDNI GSSLDHCSET NDKIAVGGCG TTSPSVPFDT IHTQQLAEII SCFSTDLLNS 720 VSRDGSLPDS TADYDNDNEV SSDDGEAIFN ELDELDSQSD ESISNHCNSC GEDLIPPTLE 780 VLKTEQYLEL NDLSFSLADD PDPCNLLLTT NLSDQNHPEL ETSSNRKALR L

Sequence ? help Back to Top

Protein Sequence Length: 831 aa Download sequence

MRSSHQPLCT RAHQAAALLL VAATFFLTRL LDRSPLSAPP PPCAAPYSPW PHRDLRIYVY  60
AEDEVDGLRA LLRGRNDDVT AATCIKGQWG TQVKIHQLLL SSRFRTFDKD EADLFFVPTY  120
VKCVRMTGKL NDKEINQTYV KVVLSQMPYF RRSGGRDHIF VFPSGAGAHL FRSWATFLNR  180
SIILTPEGDR TDKRGISAFN TWKDIIIPGN VDDSMVKSDR LAVKPIPLTK RKYLANFLGR  240
AQGKVGRLQL VKLAKQYPDK LESPELKLSG PDKLGRIDYF KHLRNAKFCL APRGESSWTL  300
RFYESFFVEC VPVILSDEVE LPFQNVIDYT EVSIKWPASK IGPGLLEYLE SIPDGRVEEM  360
IGRGREIRCL WVYAADTERC SAMSAIMWEL QRKVRRFHQS AETFWLHNRS IVNRDLVEFH  420
EWRTPHHHLL SAAAPHFLPS PTATTSYRQR SILLSMAKTS LPPGFRFHPT DVELTVYYLK  480
RKLLGKHLRC NAVSELDLYK FAPWDLPEKS SLQSKDREWY FFCPRDRKYS SGSRTNRSTE  540
AGYWKATGKD RPVIYNSQTV GMKRTLVFHL GKPPRGDRTD WVMYEYRLED KELSASGVKL  600
DACVLCKIFQ KSGPGPKIGE QYGAPFNEDD WNEANGELSS FAFSVPPCAL ESSNGRLNTA  660
GQQLAVSDNI GSSLDHCSET NDKIAVGGCG TTSPSVPFDT IHTQQLAEII SCFSTDLLNS  720
VSRDGSLPDS TADYDNDNEV SSDDGEAIFN ELDELDSQSD ESISNHCNSC GEDLIPPTLE  780
VLKTEQYLEL NDLSFSLADD PDPCNLLLTT NLSDQNHPEL ETSSNRKALR L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	7e-78	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM04G30770.2