PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM04G30770.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 896aa MW: 100372 Da PI: 7.4851

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM04G30770.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.5	3.1e-50	526	654	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppGfrFhPtd el v+yLk+k+ gk+l++ ++++e+d+yk+ PwdLp k +++++++ewyfF++rd+ky++g+r+nr+t++gyWkatgkd++v OGLUM04G30770.1 526 LPPGFRFHPTDVELTVYYLKRKLLGKHLRC-NAVSELDLYKFAPWDLPeKsSLQSKDREWYFFCPRDRKYSSGSRTNRSTEAGYWKATGKDRPV 618 79**************************.89**********95357788999******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + ++++vg+k+tLvf+ g+ p+g +tdWvm eyrle OGLUM04G30770.1 619 IY-NSQTVGMKRTLVFHLGKPPRGDRTDWVMYEYRLE 654 .999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 896 aa Download sequence
MRSSHQPLCT RAHQAAALLL VAATFFLTRL LDRSPLSAPP PPCAAPYSPW PHRDLRIYVY 60 AEDEVDGLRA LLRGRNDDVT AATCIKGQWG TQVKIHQLLL SSRFRTFDKD EADLFFVPTY 120 VKCVRMTGKL NDKEINQTYV KVVLSQMPYF RRSGGRDHIF VFPSGAGAHL FRSWATFLNR 180 SIILTPEGDR TDKRGISAFN TWKDIIIPGN VDDSMVKSDR LAVKPIPLTK RKYLANFLGR 240 AQGKVGRLQL VKLAKQYPDK LESPELKLSG PDKLGRIDYF KHLRNAKFCL APRGESSWTL 300 RFYESFFVEC VPVILSDEVE LPFQNVIDYT EVSIKWPASK IGPGLLEYLE SIPDGRVEEM 360 IGRGREIRCL WVYAADTERC SAMSAIMWEL QRKVRRFHQS AETFWLHNRS IVNRDLVEFH 420 EWRTPKGPWG REIWGGGGGR ATATGAACLS PLRAASFQFH LAASPRQHTS VLRPIPLSSP 480 LNLSSLPCRT ASASAPPSPL RGGAAFPSLA DRHHQLLRPS MAKTSLPPGF RFHPTDVELT 540 VYYLKRKLLG KHLRCNAVSE LDLYKFAPWD LPEKSSLQSK DREWYFFCPR DRKYSSGSRT 600 NRSTEAGYWK ATGKDRPVIY NSQTVGMKRT LVFHLGKPPR GDRTDWVMYE YRLEDKELSA 660 SGVKLDACVL CKIFQKSGPG PKIGEQYGAP FNEDDWNEAN GELSSFAFSV PPCALESSNG 720 RLNTAGQQLA VSDNIGSSLD HCSETNDKIA VGGCGTTSPS VPFDTIHTQQ LAEIISCFST 780 DLLNSVSRDG SLPDSTADYD NDNEVSSDDG EAIFNELDEL DSQSDESISN HCNSCGEDLI 840 PPTLEVLKTE QYLELNDLSF SLADDPDPCN LLLTTNLSDQ NHPELETSSN RKALRL

Sequence ? help Back to Top

Protein Sequence Length: 896 aa Download sequence

MRSSHQPLCT RAHQAAALLL VAATFFLTRL LDRSPLSAPP PPCAAPYSPW PHRDLRIYVY  60
AEDEVDGLRA LLRGRNDDVT AATCIKGQWG TQVKIHQLLL SSRFRTFDKD EADLFFVPTY  120
VKCVRMTGKL NDKEINQTYV KVVLSQMPYF RRSGGRDHIF VFPSGAGAHL FRSWATFLNR  180
SIILTPEGDR TDKRGISAFN TWKDIIIPGN VDDSMVKSDR LAVKPIPLTK RKYLANFLGR  240
AQGKVGRLQL VKLAKQYPDK LESPELKLSG PDKLGRIDYF KHLRNAKFCL APRGESSWTL  300
RFYESFFVEC VPVILSDEVE LPFQNVIDYT EVSIKWPASK IGPGLLEYLE SIPDGRVEEM  360
IGRGREIRCL WVYAADTERC SAMSAIMWEL QRKVRRFHQS AETFWLHNRS IVNRDLVEFH  420
EWRTPKGPWG REIWGGGGGR ATATGAACLS PLRAASFQFH LAASPRQHTS VLRPIPLSSP  480
LNLSSLPCRT ASASAPPSPL RGGAAFPSLA DRHHQLLRPS MAKTSLPPGF RFHPTDVELT  540
VYYLKRKLLG KHLRCNAVSE LDLYKFAPWD LPEKSSLQSK DREWYFFCPR DRKYSSGSRT  600
NRSTEAGYWK ATGKDRPVIY NSQTVGMKRT LVFHLGKPPR GDRTDWVMYE YRLEDKELSA  660
SGVKLDACVL CKIFQKSGPG PKIGEQYGAP FNEDDWNEAN GELSSFAFSV PPCALESSNG  720
RLNTAGQQLA VSDNIGSSLD HCSETNDKIA VGGCGTTSPS VPFDTIHTQQ LAEIISCFST  780
DLLNSVSRDG SLPDSTADYD NDNEVSSDDG EAIFNELDEL DSQSDESISN HCNSCGEDLI  840
PPTLEVLKTE QYLELNDLSF SLADDPDPCN LLLTTNLSDQ NHPELETSSN RKALRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	2e-77	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM04G30770.1