PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM04G25770.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | LBD | ||||||||
Protein Properties | Length: 77aa MW: 8119.05 Da PI: 4.4554 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 35.3 | 3.3e-11 | 1 | 43 | 58 | 100 |
DUF260 58 msslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 m+s++yeA+a+a dPv+Ga gv+l+l++ql++lk++la+++++ OGLUM04G25770.1 1 MASVAYEADAQAADPVRGADGVVLDLERQLDCLKTDLATTQSK 43 89*************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 77 aa Download sequence |
MASVAYEADA QAADPVRGAD GVVLDLERQL DCLKTDLATT QSKLALYRRR YAEPPPADAA 60 AAATAGTDTL DRARALN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16530.1 | 1e-07 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM04G25770.1 |