PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM04G12510.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 695aa MW: 74143.8 Da PI: 5.4664 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.7 | 5e-14 | 133 | 181 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h Er RR++++++fe L +l+P++ +K +Ka+i+e +++YIk+Lq OGLUM04G12510.1 133 KMHVLTERERRKEMKNKFEILHTLIPNL----PEKTDKATIVEATINYIKNLQ 181 579999*********************6....39******************9 PP | |||||||
2 | HLH | 34.3 | 4.3e-11 | 496 | 539 | 8 | 55 |
HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 Er RR+++++ f++L llPk + +K +Ka+i+ +A+ YIk L+ OGLUM04G12510.1 496 TERERRKKMKNMFSTLHGLLPKiP-----GKTDKASIVGEAIGYIKTLE 539 7*********************88.....9****************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 695 aa Download sequence |
MSQEGPNNHP QGTQETHDCP FTIATNTPLG STKMGYSDSR KSDENNTSSK PASPVVSSDV 60 VEIKETWENV VVADEEGEGG EDGFASDASE SKSKSSSDEV DYELLDLLAG ASEGCSGGNN 120 NDEVKNFAYA DHKMHVLTER ERRKEMKNKF EILHTLIPNL PEKTDKATIV EATINYIKNL 180 QDKIHKMEML KVEREHAIAL AAAATATAAA SADTALQAPP PSEEENEEEH DSVVAAATRE 240 MALADMVHAW EQQQEAAATG GSHGGHAVPP PPPAASLQTW TGPNMTASLT GDDGFITLSL 300 PHQGGQKNLV AGAVSVLERH HIDVVTATVS ASEQGDNLIS LHCHLSPGSS SSQNLTPLDK 360 FKLAMSELML WSQYLHLPIH PMSQEGADLS QDVDESPYHT AVVTTNNLVR SIKAEKSNSS 420 SSSGKPVETD IGLKVASPTM FGFNTKIEGT GKNMAVKREE GEGGGRPSVS SGVNTRDTNG 480 KGKNAMDMEH ALHIWTERER RKKMKNMFST LHGLLPKIPG KTDKASIVGE AIGYIKTLED 540 VVQKLETIKT ERVRAHQWAA AAAAAVAANG GGEGSSHSHS QPPRHATAVT VAVAEPAPVA 600 AAVNAQAPQK KAAAAAAPTL QTWSAPNITL TMAGVDAFIN MCLPRQRASF TTVAFVLEKH 660 QIDVLNEASL QSTEGLTPEA KYKLAVSELM VRLAE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 2e-21 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM04G12510.1 |