PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM04G02300.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | CPP | ||||||||
Protein Properties | Length: 97aa MW: 11279.9 Da PI: 7.9071 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 39.9 | 8.7e-13 | 5 | 43 | 2 | 40 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++++C+C ks+C+k+YC C +a +Cs++C+C++CkN+e OGLUM04G02300.1 5 QHRSCRCVKSNCVKLYCPCLSAYGYCSQNCRCTNCKNRE 43 6789*********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence |
MSNDQHRSCR CVKSNCVKLY CPCLSAYGYC SQNCRCTNCK NREYYEDFVE ERVDMIKMKN 60 PRAFDPKIVR VQDASEIEPQ SSNAVPMPEV QVPRTFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04850.1 | 9e-17 | CPP family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM04G02300.1 |