PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G40290.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NAC | ||||||||
Protein Properties | Length: 242aa MW: 26084.8 Da PI: 5.4034 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 54.5 | 4e-17 | 8 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 l pG+ F+P+d+ l++ +L++k+++ ++e + i+++d+y+++P +L ++ ++ s+ k++a+g+r++ + +++Wk+ g +k+v OGLUM03G40290.1 8 LEPGYAFRPSDDGLITLFLRPKIAKIPFEH-RLINHTDVYSADPAELVGEH-RPAPGTHGSSSVCKRKASGRRQRAVGGESVWKSEGGKKAVNG 99 579************************999.89**************7332.223466777777777778888888889*************** PP NAM 95 kkgelvglkktLvfy......kgrapkgektdWvmheyrl 128 ++g+ vg + + + +g+a++ ++ W+m ey l OGLUM03G40290.1 100 ADGRRVGYLQKFSYGvyesssSGSARTFTRLGWCMTEYGL 139 ********99999966677766889999999*******76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MDDDEIALEP GYAFRPSDDG LITLFLRPKI AKIPFEHRLI NHTDVYSADP AELVGEHRPA 60 PGTHGSSSVC KRKASGRRQR AVGGESVWKS EGGKKAVNGA DGRRVGYLQK FSYGVYESSS 120 SGSARTFTRL GWCMTEYGLD DDATDGADKH VLCKVYRSPR AVCAEARTAA AKCSGYKRKA 180 DDGEDHPEAA PPSARPRQEE AGSEHDEQPE LDLDALLSAP TDENLESTFS TAATAVALAL 240 VV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 4e-13 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G40290.1 |