PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G40270.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | GRAS | ||||||||
Protein Properties | Length: 243aa MW: 26036.3 Da PI: 8.4692 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 83 | 5e-26 | 1 | 120 | 241 | 369 |
GRAS 241 vveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplseka 333 ++eqea+hn++ + e+f+eal+yy+alfd+l a + +++r v ++ g + ++g +rrerhe+le+W le aGF+ vpls++a OGLUM03G40270.1 1 MTEQEASHNAAGLTEQFVEALNYYAALFDCLrGARV-GGAHARGAVAAQG-GDQ-----EHRGVRRRERHERLERW---LEGAGFGRVPLSYYA 84 68*****************************66666.5556666666662.333.....58999************...789************ PP GRAS 334 akqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369 qa+++ + + dg+++ ee+g ++l+W+dr+L+s OGLUM03G40270.1 85 LLQARRVAQGLGCDGFKIREEKGNFFLCWQDRALFS 120 **********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MTEQEASHNA AGLTEQFVEA LNYYAALFDC LRGARVGGAH ARGAVAAQGG DQEHRGVRRR 60 ERHERLERWL EGAGFGRVPL SYYALLQARR VAQGLGCDGF KIREEKGNFF LCWQDRALFS 120 SPENAAPAAA PAPAPAPTPA PPPPPSSPPT KSGIPPRYDL DAKWDACLDL SIRRVAYSTL 180 GGTFAGLLLF RSPTTRWASV ALGAGVGIGA AYTECSYLFN GAPPKWSPKV STVPSAHSEG 240 EDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 1e-21 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G40270.1 |