PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G38790.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | AP2 | ||||||||
Protein Properties | Length: 419aa MW: 45528.8 Da PI: 8.0367 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 22.4 | 3e-07 | 121 | 142 | 1 | 22 |
AP2 1 sgykGVrwdkkrgrWvAeIrdp 22 s+y+GV++++++grW+++I+ + OGLUM03G38790.2 121 SQYRGVTFYRRTGRWESHIWAY 142 78*****************984 PP | |||||||
2 | AP2 | 42.1 | 2.1e-13 | 194 | 244 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ +k grW+A+ g +k+++lg f+t+ eAa+a+++a+ +++g OGLUM03G38790.2 194 SKFRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDTEVEAARAYDRAAIRFNG 244 79********.7******...5...334336**********99**********99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence |
MVLDLNVESP ERSGTSSSSV LNSGDAGGGG GGGGGGGGGG GLFRFDLLAS SPDDDECSGE 60 QHQLPAASGI VTRQLLPPPP PAAPSPAPAW QPPRRAAEDA ALAQRPVVAK KTRRGPRSRS 120 SQYRGVTFYR RTGRWESHIW AYDRAAIKFR GLEADINFNL SDYEDDLKQM RNWTKEEFVH 180 ILRRQSTGFA RGSSKFRGVT LHKCGRWEAR MGQLLGKKYI YLGLFDTEVE AARAYDRAAI 240 RFNGREAVTN FEPASYNVDA LPDAGNEAIV DGDLDLDLRI SQPNARDSKS DVATTGLQLT 300 CDSPESSNIT VHQPMGSSPQ WTVHHQSTPL PPQHQRLYPS HCLGFLPNLQ ERPMDRRPEL 360 GPMPFPTQAW QMQAPSHLPL LHAAASSGFS AGAGAGVAAA TRRQPPFPAD HPFYFPPTA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 3e-76 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G38790.2 |