PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G36620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | LBD | ||||||||
Protein Properties | Length: 181aa MW: 19294.6 Da PI: 8.2969 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 120 | 1.3e-37 | 22 | 122 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +CaaCk+lrr+C++dCvlap+fpa++p+++a+v+++FGa n +++l++lp +er +a++s++ eA r++dPvyG++gvi++lq+q++ ++ el OGLUM03G36620.1 22 RCAACKFLRRRCSRDCVLAPHFPASDPHRYACVQRVFGAGNTTRMLQQLPAQERGRAADSMAAEAYRRVQDPVYGCAGVINRLQNQIRAAQCEL 115 6********************************************************************************************* PP DUF260 95 allkeel 101 a +++++ OGLUM03G36620.1 116 AWTHAQI 122 **99885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MSPGEDDVEA SSDSGGSAII RRCAACKFLR RRCSRDCVLA PHFPASDPHR YACVQRVFGA 60 GNTTRMLQQL PAQERGRAAD SMAAEAYRRV QDPVYGCAGV INRLQNQIRA AQCELAWTHA 120 QIAMHSAAAA AHARTTPPPR ATLPPGQRDG GGVAGAPSST QQATTSAAWP LEDFASEFSF 180 P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26660.1 | 4e-44 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G36620.1 |