PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OGLUM03G34610.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

WRKY

Protein Properties

Length: 817aa MW: 88119.4 Da PI: 7.1501

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G34610.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89.9	2.1e-28	572	628	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+ k++e prsYY+Ct gCpvkk vers+ d+ + eitY+g+H h+ OGLUM03G34610.1 572 KDGYNWRKYGQKQLKDAESPRSYYKCTRDGCPVKKIVERSS-DGCIKEITYKGRHSHP 628 8**************************************.*************7 PP
2	WRKY	102.2	3e-32	717	775	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg++ prsYY+Ct gC+v+k++er++ dpk+v +tY+g+Hnh+ OGLUM03G34610.1 717 LDDGYRWRKYGQKVVKGNPRPRSYYKCTADGCNVRKQIERASADPKCVLTTYTGRHNHD 775 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 817 aa Download sequence
MFTVDKYQQV GFFQEEKAFA LRYQTAGMLE TVLRAGVLGE DDTGEESPKN LKIPSRKPSI 60 VCENCLYSRE GNGRVRAFHI MDPKGVLDML IIFHEKQGSE VPLMYSSDDA DITNSDRIAP 120 LLGRWEGRSV TKRSGVYGAT LSEADTVVLL EKDRNGQLIL DNMSAKSGSS TTTTVHWTGS 180 ANNNLLQFDG GYEMTLLPGG MYMGYPTDIG KIVNDMDSFH LEFCWMESPG KRQRLVRTYD 240 SAGLAVSSTY FFETKRLSSL KPHHHLRRRV GDHGRTPDLS NANRVAGEGE GGDRFRRRRV 300 AAVTAAAIDR AKSPEEGDSF RWFWKYSAQA VGASQSNPNT SRSDPLSWSA AVVVIDREAL 360 PLHKQRKLTR AAAAAMADRR RSDGGGGGGG MQQQPFTSPG QERVFDGGGV PGQVAAPYGS 420 DFDQSSYMAL LAAGAVGVGV GVQPTAAPWA VEEDVAAAPP GISLAPQFSM ANYAPPPSYQ 480 HPATLVSPPL AAGLHPYPPY LHGVDAPPPQ WPPRPAPPPS FSVLDLAAAA APHEQRHSMQ 540 QLLLRAAAFG GGMHAAAAPA PAAAAAIEQP AKDGYNWRKY GQKQLKDAES PRSYYKCTRD 600 GCPVKKIVER SSDGCIKEIT YKGRHSHPRP VEPRRGGAAS SSSSTMAAGT DHNAGAAADD 660 AAAADEDDPS DDDDTLLHED DDDGEEGHDR GVDGEVGQRV VRKPKIILQT RSEVDLLDDG 720 YRWRKYGQKV VKGNPRPRSY YKCTADGCNV RKQIERASAD PKCVLTTYTG RHNHDPPGRP 780 PAAANLQMPG PAAMSLAGGG TAHQQPSGGA HQMKEET

Sequence ? help Back to Top

Protein Sequence Length: 817 aa Download sequence

MFTVDKYQQV GFFQEEKAFA LRYQTAGMLE TVLRAGVLGE DDTGEESPKN LKIPSRKPSI  60
VCENCLYSRE GNGRVRAFHI MDPKGVLDML IIFHEKQGSE VPLMYSSDDA DITNSDRIAP  120
LLGRWEGRSV TKRSGVYGAT LSEADTVVLL EKDRNGQLIL DNMSAKSGSS TTTTVHWTGS  180
ANNNLLQFDG GYEMTLLPGG MYMGYPTDIG KIVNDMDSFH LEFCWMESPG KRQRLVRTYD  240
SAGLAVSSTY FFETKRLSSL KPHHHLRRRV GDHGRTPDLS NANRVAGEGE GGDRFRRRRV  300
AAVTAAAIDR AKSPEEGDSF RWFWKYSAQA VGASQSNPNT SRSDPLSWSA AVVVIDREAL  360
PLHKQRKLTR AAAAAMADRR RSDGGGGGGG MQQQPFTSPG QERVFDGGGV PGQVAAPYGS  420
DFDQSSYMAL LAAGAVGVGV GVQPTAAPWA VEEDVAAAPP GISLAPQFSM ANYAPPPSYQ  480
HPATLVSPPL AAGLHPYPPY LHGVDAPPPQ WPPRPAPPPS FSVLDLAAAA APHEQRHSMQ  540
QLLLRAAAFG GGMHAAAAPA PAAAAAIEQP AKDGYNWRKY GQKQLKDAES PRSYYKCTRD  600
GCPVKKIVER SSDGCIKEIT YKGRHSHPRP VEPRRGGAAS SSSSTMAAGT DHNAGAAADD  660
AAAADEDDPS DDDDTLLHED DDDGEEGHDR GVDGEVGQRV VRKPKIILQT RSEVDLLDDG  720
YRWRKYGQKV VKGNPRPRSY YKCTADGCNV RKQIERASAD PKCVLTTYTG RHNHDPPGRP  780
PAAANLQMPG PAAMSLAGGG TAHQQPSGGA HQMKEET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	1e-35	WRKY family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G34610.1