PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM03G29380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 337aa MW: 36727 Da PI: 5.6592 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.9 | 8.3e-09 | 247 | 280 | 22 | 55 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yps+ e++ LA+++gL+ +q+ +WF N+R ++ OGLUM03G29380.1 247 WPYPSELEKAALAESTGLDAKQINNWFINQRKRH 280 59*****************************885 PP | |||||||
2 | ELK | 35.7 | 1.8e-12 | 200 | 221 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +Ll+KYsgyL+sL+ E+s OGLUM03G29380.1 200 ELKSHLLNKYSGYLSSLWRELS 221 9*******************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 337 aa Download sequence |
MEQQLPLLAP DSKAATSSPL CLTLDNPTST STSPAVPSSA PPPAAALEPS RQSFHERETD 60 AIKAKIMSHP LYPALLRAFI DCQKVGAPPE VVGRLSALAG ELDSRAEDRH LQGQSSDPEL 120 DEFMETYIDM LVSYRQELTR PIQEADQFFR NMEAQIDSFT LDDNGSEGGN SSEDEQEAGG 180 GDMASAGLPE ITSPCAEDKE LKSHLLNKYS GYLSSLWREL SKKKKKGKLP RDARQKLLHW 240 WQLHYRWPYP SELEKAALAE STGLDAKQIN NWFINQRKRH WKPTPPAMEY RSLQPAGAAS 300 YGGASAGAST SGGGSAVVRG MEGQHFTGGG AYPRGGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G08150.1 | 1e-84 | TALE family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM03G29380.1 |