PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G27730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 540aa MW: 56457.4 Da PI: 7.208 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.1 | 6.4e-13 | 360 | 399 | 11 | 55 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq OGLUM03G27730.1 360 RRRDRINEKMRALQELIPHC-----NKTDKASMLDEAIEYLKSLQ 399 8******************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 540 aa Download sequence |
MNQFVPDWSN MGDASRTLGE DDNLIELLWC NGHVVMQSQN HHRKLPPRPP EKAAAAQGSS 60 AAVQEDEAGL WFPFALADSL DKDIFSDLFY EAPVAATAAA APAGPGAGAD GEGKTCKGDT 120 AMAEEERGGP GAASEAPREL MPPPKSTHAS CSRQQTMSLA DGGDNAGDLS ELVRARRSSG 180 GAARRKAEAG GGGGGASSSM LSAIGSSICG SNQVQVQQRT ASEPGRRGAP PSAVGSANAI 240 PCGGRGHGHG HEATTVASSS GRSNCCFGTT TTTEPTSTSN RSSKRKRLDT TEDSESPSED 300 AESESAALAR KPPAKMTTAR RSRAAEVHNL SERVRPNPFL LVFNAMGSCL TLMPLAPFVR 360 RRDRINEKMR ALQELIPHCN KTDKASMLDE AIEYLKSLQL QLQMMWMGSG MAPPVMFPGV 420 HQYLPRMGVG MGAAAAAAMP RMPFMAAPQP VVPTPPVNHL ADGSPGYRGH MPAAAAAAVG 480 LAEPYAHYLG VNHLQPPPTQ GVGYYPLGAK AVQQQQNPPL HVPNGSIMPP ENAPNTGSGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09530.2 | 3e-28 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G27730.1 |