PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G27330.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 323aa    MW: 34856.4 Da    PI: 6.5102
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G27330.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.21e-5551301128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      lppGfrFhPtdeelv++yL++kv++  + + ++i++vd++k+ePwdLp+k++ +ekewyfFs rd+ky+tg r+nrat+sgyWk+tgkdke+++
  OGLUM03G27330.1   5 LPPGFRFHPTDEELVTYYLARKVSDFGFAT-RAIADVDLNKCEPWDLPSKASMGEKEWYFFSMRDRKYPTGIRTNRATDSGYWKTTGKDKEIFH 97 
                      79*************************999.89***************999999**************************************** PP

              NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +g+l g+kktLvfy+grapkg kt+Wvmheyrl
  OGLUM03G27330.1  98 -GGALAGMKKTLVFYRGRAPKGAKTSWVMHEYRL 130
                      .*******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MEEGLPPGFR FHPTDEELVT YYLARKVSDF GFATRAIADV DLNKCEPWDL PSKASMGEKE  60
WYFFSMRDRK YPTGIRTNRA TDSGYWKTTG KDKEIFHGGA LAGMKKTLVF YRGRAPKGAK  120
TSWVMHEYRL QSKFPYKPAK DEWVVCRVFK KLQCHLAKPR PPHDDVDGDS ASPPEMVDAS  180
SLGELGELDV SSILLGGFAP PSGELCHGGG GGDGFGAHRL DVGAYMSWLQ AAAAANQGMF  240
QWPAATQAGL VGGTVFAAAH KAAGTMPFGG GCSQQQARDV GVSLANVGGG DALFGGAPLA  300
KVDMECGEQA PQLDMDDSTW RAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.12e-92NAC family protein