PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM03G25450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 500aa MW: 53850.2 Da PI: 3.9551 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 82.2 | 1e-25 | 7 | 145 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk..dke 91 l pG+rF+P+d+elv++yL +++++k+l+l+ vi ++d ++v Pw+L + +++ +e +fF+ ++ k+ +gkr++r + g+W+ + d e OGLUM03G25450.1 7 LLPGLRFDPSDDELVSRYLLRRIQQKPLPLDGVIVDADPLSVPPWTLLAD-HTRGDEAFFFAGARAKNGKGKRQKRtVEGGGFWQGQRMavDGE 99 579***************************999**************743.456789*******************555599**9665522222 PP NAM 92 vlsk..........kgel.....vglkktLvfykgrapkgektdWvmheyrl 128 + + ++ k +L f+ ++ ++g ++ Wvmhey++ OGLUM03G25450.1 100 R--LvvpgddggggG--DegleiTWRKYVLSFF-AEGERG-SSGWVMHEYAV 145 2..133456666550..155565899999****.444454.89*******86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 500 aa Download sequence |
MAGADGLLPG LRFDPSDDEL VSRYLLRRIQ QKPLPLDGVI VDADPLSVPP WTLLADHTRG 60 DEAFFFAGAR AKNGKGKRQK RTVEGGGFWQ GQRMAVDGER LVVPGDDGGG GGDEGLEITW 120 RKYVLSFFAE GERGSSGWVM HEYAVTSPAD LASSQLRLYR VRFSGHGKKR KREPQCLDSH 180 DDDDGGDQES ATHRRAVAET TLFDGYVPRP AADGTDQGTY GVIDGESSLA SHCLPDQIVP 240 PAEEVDATAG VENPLLDEER WSPPQPALVK QNSYDLMAIS SLLFSDLPDR IDDDDLSVSQ 300 TEGTELSEQG SSGVIGDDYW RVFHGLSDLI ALPEVEADAT GGAETEKISL LDEERRPPPQ 360 PAPPTAALVP PLQGQSSYDL MADSSLLFAD LPGSIDDDEL QRSLRASDMP DQFLAQTEEA 420 GAGGGGGAAA ALNKQSNSSP LGVEVPMALS DLESPESMPL SDLEFPESID EVLSYIDFTT 480 DDTSCLDFDM DELFSDMPAD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G39820.1 | 4e-14 | NAC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM03G25450.1 |