PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G23890.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | B3 | ||||||||
Protein Properties | Length: 194aa MW: 20922.9 Da PI: 11.3534 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 45.7 | 1.2e-14 | 17 | 111 | 1 | 86 |
EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k++tp+dv+k++rlv+pk++ae+h + +++ t ++++ s + + +++sg++ t+ ++Fv+++gL++gD+vvF++ OGLUM03G23890.1 17 FEKAMTPNDVGKLNRLVVPKQHAEKHfplrrtsfD-ASATAAAATCNSTRACSSTSRTARgrCGGSGTHARTAARSRFVREKGLRAGDTVVFSR 109 99*************************99998852.33344566666666666666664444566677************************96 PP -S CS B3 85 dg 86 + OGLUM03G23890.1 110 SA 111 64 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MGARTQPTPS WAREPLFEKA MTPNDVGKLN RLVVPKQHAE KHFPLRRTSF DASATAAAAT 60 CNSTRACSST SRTARGRCGG SGTHARTAAR SRFVREKGLR AGDTVVFSRS AYGPDKLLFI 120 DCKKNNTAAA TGDEKPITSG EAARVGRLFG MDITGGGGNF RKRERAVEMG QEAFLMKRQC 180 VVHQRTPALG ALLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13260.1 | 2e-22 | RAV family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G23890.1 |