PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G12690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 377aa MW: 40782.3 Da PI: 9.5365 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.4 | 7.1e-05 | 233 | 276 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ ++R +++ +++ L++l+ + +K + a++L +A +I++L OGLUM03G12690.1 233 KATCKKRSQKLGDRITALQQLVSPY-----GKTDTASVLHEAAACIRQL 276 56669******************99.....9*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 377 aa Download sequence |
MLTDELERKR YRTLILVADT FLANDLRQFP SAKLKASLYT STLANIFILM LKGSTGIQLL 60 SLFSGYMKDD VSSAVETQLA ESCRLESGVE TCRLLVSSVA VKCEASNSPS TTVGFDRMIA 120 ADYDLFHHMS FSPSLQNLQS PTFFTTRSSE SYLGESSIYG GGARPALAQF SYSQPIAATS 180 AAHLVRWTAA GEPMTGDGGF RSSKRLKTAT TATTQPPRHG VKCHAKPRNQ TTKATCKKRS 240 QKLGDRITAL QQLVSPYGKT DTASVLHEAA ACIRQLHQQI QILTAPYPGT SSSSASSQQQ 300 VVFSVLESCS HVMSFFTAIA TVLWLQDAGG GGGTATELRR RGLCVAALSP AVVSLAAEGG 360 RRRTDVEDQK RIWFSNQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19500.1 | 4e-17 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G12690.1 |