PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G12370.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 399aa MW: 40372.6 Da PI: 9.4709

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G12370.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.3	3.8e-39	87	146	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +e alkcprCdstntkfCyynnyslsqPr+fCk+CrryWt+GG+lrnvPvGgg+r+nk+s OGLUM03G12370.1 87 PEPALKCPRCDSTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGSLRNVPVGGGCRRNKRS 146 67899*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MVFPSVPAYL DPPNWNNQQG QPPRPANVGG GDAQHLPVGP TAAAAAPDEI GGLPTSSSSA 60 SAAAAAVQQA RPNSMAERAR LARAPQPEPA LKCPRCDSTN TKFCYYNNYS LSQPRHFCKT 120 CRRYWTRGGS LRNVPVGGGC RRNKRSGKSS SSAAAGASSS SSKPSSSAAR QLPGGGASPM 180 PSAAASTQPG GAAAGAIIPP SGLSSMSHHL PFLGAMHPPG SNLGLTFSAG FQPLGGMHHH 240 VDTADQFPVA SGGGATIGAS LEQWRVQQQP QQHQFPFLGG ALELPPPPPM YQLGLEATRA 300 AGTGATAAAA FTLGQTSATA TTSRQEGSMK LEDSKGLEMS LQRQYMAALR QGDGVWGNNN 360 GGNGGSDGGG NGGGGSWTMN FPGFHSSSGG GGDDGGGVL

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MVFPSVPAYL DPPNWNNQQG QPPRPANVGG GDAQHLPVGP TAAAAAPDEI GGLPTSSSSA  60
SAAAAAVQQA RPNSMAERAR LARAPQPEPA LKCPRCDSTN TKFCYYNNYS LSQPRHFCKT  120
CRRYWTRGGS LRNVPVGGGC RRNKRSGKSS SSAAAGASSS SSKPSSSAAR QLPGGGASPM  180
PSAAASTQPG GAAAGAIIPP SGLSSMSHHL PFLGAMHPPG SNLGLTFSAG FQPLGGMHHH  240
VDTADQFPVA SGGGATIGAS LEQWRVQQQP QQHQFPFLGG ALELPPPPPM YQLGLEATRA  300
AGTGATAAAA FTLGQTSATA TTSRQEGSMK LEDSKGLEMS LQRQYMAALR QGDGVWGNNN  360
GGNGGSDGGG NGGGGSWTMN FPGFHSSSGG GGDDGGGVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.3	7e-44	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G12370.1