PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G09560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 831aa MW: 89471.1 Da PI: 5.6138 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35 | 2.5e-11 | 658 | 706 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P + +k Ka++L + ++Y++sLq OGLUM03G09560.1 658 NSHSLAERFRREKINERMKLLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 706 58**************************....999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 831 aa Download sequence |
MKLRLRSMDQ RGGAGAAAAE THRVQLPDTA TLSDVKAFLA TKLSAAQPVP AESVRLTLNR 60 SEELLTPDPS ATLPALGLAS GDLLYFTLSP LPSPSPPPQP QPQAQPLPRN PNPDVPSIAG 120 AAGPTKSPVE SGSSSSMPQA LCTNPGLPVA SDPHHPPPDV VMAEAFAAIK SKSSLVVGAT 180 KREMENVGGA DGTVICRLVV ALHAALLDAG FLYANPVGSC LQLPQNWASG SFVPVSMKYT 240 LPELVEALPA VEEGMVAVLN YSLMGNFMMV YGHVPGATSG VRRLCLELPE LAPLLYLDSD 300 EVSTAEEREI HELWRVLKDE MCLPLMISLC QLNNLSLPPC LMALPGDVKA KVLEFVPGVD 360 LARVQCTCKE LRDLAADDNL WKKKCEMEFN TQDTCGCMMC KCIYSDQRKD IVLADKYTRG 420 NYMQKPVTQP GSGGPEAILH PSDPAQFTHP VLQPQRSKYK NPIRCQHTSA CRWQDAPAAG 480 IHFDCIIPLP INPYQLPPSA GACCSTTQAS ASAKDGGNVL QIPKPLEMYS PPCSAAASSQ 540 GHCFAVGANQ LASLDLAMDF DEPILFPVHN ASLQEGIQFY NPTGDTQLSR NMSIDKCLKG 600 SKRKGSGEGS SSLHSQEETG EMPQRELSME HAGEKAGDAD ASREEYVHVR AKRGQATNSH 660 SLAERFRREK INERMKLLQD LVPGCNKITG KAMMLDEIIN YVQSLQRQVE FLSMKLSTIS 720 PELNSDLDLQ DILCSQDARS AFLGCSPQLS NAHPNLYRAA QQCLSPPGLY GSVCVPNPAD 780 VHLARAAHLA SFPQQRGLIW DEELRNIAPA GFASDAAGTS SLENSDSMKV E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10120.1 | 2e-45 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G09560.1 |