PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM03G05530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | NF-YA | ||||||||
Protein Properties | Length: 239aa MW: 26284.3 Da PI: 9.3957 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 107 | 1.5e-33 | 137 | 193 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq Rakle+e+kl k+rkpylheSRh+hA++R+Rg+gGrF OGLUM03G05530.1 137 EEPIYVNAKQYHAILRRRQLRAKLEAENKL-VKNRKPYLHESRHQHAMKRARGTGGRF 193 69****************************.**************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 239 aa Download sequence |
MLPPHLTENG TVMIQFGHKM PDYESSATQS TSGSPREVSG MSEGSLNEQN DQSGNLDGYT 60 KSDEGKMMSA LSLGKSETVY AHSEPDRSQP FGISYPYADS FYGGAVATYG THAIIHPQIV 120 GVMSSSRVPL PIEPATEEPI YVNAKQYHAI LRRRQLRAKL EAENKLVKNR KPYLHESRHQ 180 HAMKRARGTG GRFLNTKQQP EATDGGTPRL VSANGVVFSK HEHSLSSSDL HHRRAKEGA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G14020.1 | 6e-44 | NF-YA family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM03G05530.1 |