PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G01630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | B3 | ||||||||
Protein Properties | Length: 316aa MW: 34297.7 Da PI: 10.4128 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 100.6 | 9.1e-32 | 37 | 141 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.s 88 f+kv tpsdv+k++rlv+pk++ae++ ++e++ l++ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F + g+ OGLUM03G01630.1 37 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldAASNEKGLLLSFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGvGEaA 130 89****************************55567889*************************************************6658889 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +++l++ ++r+ OGLUM03G01630.1 131 RGRLFIDWRRR 141 999**999997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MEFITPIVRP ASAAAGGGEV QESGGRSLAA VEKEHMFDKV VTPSDVGKLN RLVIPKQHAE 60 KYFPLDAASN EKGLLLSFED RTGKPWRFRY SYWNSSQSYV MTKGWSRFVK EKRLDAGDTV 120 SFGRGVGEAA RGRLFIDWRR RPDVVAALQP PTHRFAHHLP SSIPFAPWAH HHGHGAAAAA 180 AGARFLLPPS STPIYDHHRR HAHAVGYDAY AAATSRQVLF YRPLPPPQQH HPAVVLESVP 240 VRMTAGHAEP PSAPSKRVRL FGVNLDCANS EQDHAGVVGK TAPPPLPSPP SSSSSSSGKA 300 RSIGLSFQGI SNSSYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46870.1 | 2e-72 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G01630.1 |