PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G01540.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 650aa MW: 72807.3 Da PI: 6.474

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G01540.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.6	9.4e-57	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppGfrFhPtdeel+ +yLk+k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v OGLUM03G01540.1 6 LPPGFRFHPTDEELIIYYLKRKINGRQIEL-EIIPEVDLYKCEPWDLPeKsFLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKV 98 79**************************.99**********95334455777******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++vg+kktLv+y+grap+g++tdWvmheyrl OGLUM03G01540.1 99 NS-QRRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRL 133 .8999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
MAPVSLPPGF RFHPTDEELI IYYLKRKING RQIELEIIPE VDLYKCEPWD LPEKSFLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QRRAVGMKKT LVYYRGRAPH 120 GSRTDWVMHE YRLDERECET DTGLQDAYAL CRVFKKTAPG PKIIEHYGVV HHHVEQPQWM 180 TSSIDRSPTL DVSCDGRGDD FESSSFSFPT ETPMDSMHGG FGMQMSAPHE DGKWMQFLSE 240 DAFNATNPFL TNPVSANFSC LPSKVDVALE CARLQHRLTL PPLEVEDFPQ DVSLDTKTGI 300 LRSNPNEVDI LQEFLSVATA SQELINGSTS SYPEMWLGAS TSSASYVNEL SSLVEMGGVG 360 TSNHHESARL QVEIADMEVF KDDKKRVENL RGVKLVNNDL GEIVVEGDES NPTEDIIAQY 420 PIKVTADNSG EAGHRMTDPT DVGGIDTAPI FSQSQPDDFA AGFDDVNPNA SFDLYEKVDV 480 NHRLFVSRVA AAKTFFHRIE PSKKVSFHSN PAATAVSKAT EKFHFPVTTK VSGRVSIFSK 540 FKALIRDKFL MMRPSHSYQR LGSKETTVNE LLQIVSLLLA PKQINGCPTE QELVKKKAKE 600 VMKPGWGREG SNKLWLPLSK GKGISSMFLS GKWTFLTSAL AISTPAECDH

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

MAPVSLPPGF RFHPTDEELI IYYLKRKING RQIELEIIPE VDLYKCEPWD LPEKSFLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QRRAVGMKKT LVYYRGRAPH  120
GSRTDWVMHE YRLDERECET DTGLQDAYAL CRVFKKTAPG PKIIEHYGVV HHHVEQPQWM  180
TSSIDRSPTL DVSCDGRGDD FESSSFSFPT ETPMDSMHGG FGMQMSAPHE DGKWMQFLSE  240
DAFNATNPFL TNPVSANFSC LPSKVDVALE CARLQHRLTL PPLEVEDFPQ DVSLDTKTGI  300
LRSNPNEVDI LQEFLSVATA SQELINGSTS SYPEMWLGAS TSSASYVNEL SSLVEMGGVG  360
TSNHHESARL QVEIADMEVF KDDKKRVENL RGVKLVNNDL GEIVVEGDES NPTEDIIAQY  420
PIKVTADNSG EAGHRMTDPT DVGGIDTAPI FSQSQPDDFA AGFDDVNPNA SFDLYEKVDV  480
NHRLFVSRVA AAKTFFHRIE PSKKVSFHSN PAATAVSKAT EKFHFPVTTK VSGRVSIFSK  540
FKALIRDKFL MMRPSHSYQR LGSKETTVNE LLQIVSLLLA PKQINGCPTE QELVKKKAKE  600
VMKPGWGREG SNKLWLPLSK GKGISSMFLS GKWTFLTSAL AISTPAECDH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-127	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G01540.1