PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G01370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 199aa MW: 20839.2 Da PI: 5.0837 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56 | 1e-17 | 24 | 74 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 + y+G+r + +g+Wv+eIr+p gk+ r++lg++ t+e+Aa+a++aa+++l+g+ OGLUM03G01370.1 24 PVYRGIRLR--SGKWVSEIREP---GKSSRIWLGTYPTPEMAAAAYDAAALALRGA 74 68****986..5*********8...557*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MDRDESLGTQ PLTGRRVRAD TRHPVYRGIR LRSGKWVSEI REPGKSSRIW LGTYPTPEMA 60 AAAYDAAALA LRGADAALNF PGTATSRPAP TSGSPDDIRA AAAAAAAMIG SGHRGKQRAA 120 DASTSRAAPA PEAAVAAGAG DQKRVVDEDD VFEMPRLLVS MAEGLMMSPP RLSPSTDGVG 180 GVSPEDDEDE DGMSLWNHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 4e-30 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G01370.1 |