PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G37650.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bHLH
Protein Properties Length: 280aa    MW: 31566.9 Da    PI: 7.3493
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G37650.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.61.7e-1658104455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       hn  E+rRR+riN+++  L++l+P++      K +Ka++L  A+eY+k+Lq
  OGLUM02G37650.1  58 VHNLSEKRRRSRINEKMKALQSLIPNS-----SKTDKASMLDDAIEYLKQLQ 104
                      6*************************8.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MMDGRGSQEE EHLDLIMRHH ASMGLDRCES EEALGSSESE QPTRPARPRG KRSRAAEVHN  60
LSEKRRRSRI NEKMKALQSL IPNSSKTDKA SMLDDAIEYL KQLQLQVQML SMRNGLYVPP  120
VNLSGAPEHL PIPQMSAALD QNSAKASDPS VVLQPVNQTS GALLPFELAS QHKPLFLPGV  180
RNATALEPRF LVESSRSNLQ SLRFTEPAEM IYPDEMMLKH RLTSANESTI VPGTDEKSVR  240
QNTYMMNADR FDRYALSKDQ LQHIMPKNTE SVLDMPHLQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.16e-35bHLH family protein